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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Nkx2-5, NK2 transcription factor related, locus 5 (Drosophila)
Sequence ID:NM_008700
Entrez Gene ID:18091
Ensembl ID:ENSMUSG00000015579

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 A3.3|17 13.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:17: 26838664 - 26841468

NM_008700 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
19832697560926976591
98415242697796926978509

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8862321Full LengthBC139299NK2 transcription factor related, locus 5 (Drosophila)
8862325Full LengthBC139303NK2 transcription factor related, locus 5 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032726  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008700 NP_032726 P42582
Q3UQU2
Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC139299 AAI39300 Q3UQU2
BC139303 AAI39304 Q3UQU2
AK142146 BAE24947 P42582
Q3UQU2
X75415 CAA53169 P42582
Q3UQU2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nkx2-5 NP_032726 R.norvegicus Nkx2-5 114109   NP_446103 94
H.sapiens NKX2-5 1482 Gene Info NP_004378 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta