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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Slc6a20b, solute carrier family 6 (neurotransmitter transporter), member 20B
Sequence ID:NM_011731
Entrez Gene ID:22599
Ensembl ID:ENSMUSG00000025243

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 F|9 70.9 cM

Chromosomal Position (from UCSC)

Chromosomal Position:9: 123594992 - 123632389

 Exon Info From UCSC:
NM_011731

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4242168Full LengthBC013484solute carrier family 6 (neurotransmitter transporter), member 20B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035861  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011731 NP_035861 O88575 SNF

Related Sequences

 
mRNAGenPeptSwissProt
AF075261 AAC27756 O88575
BC013484 AAH13484 O88575
AK076806 BAC36489 Q8C604
AK144038 BAE25668 O88575
AK164706 BAE37885 O88575

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc6a20b NP_035861 R.norvegicus RGD1566368 301083   XP_002730032 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)