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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Abca5, ATP-binding cassette, sub-family A (ABC1), member 5
Sequence ID:NM_147219
Entrez Gene ID:217265
Ensembl ID:ENSMUSG00000018800

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 E1|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 110272458 - 110329238

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3671842IncompleteBC064823ATP-binding cassette, sub-family A (ABC1), member 5
5027267IncompleteBC039624ATP-binding cassette, sub-family A (ABC1), member 5
100063183BC156556ATP-binding cassette, sub-family A (ABC1), member 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_671752  

Protein Infomation

NM_147219 NP_671752 Q8K448 ABC_tran

Related Sequences

BC064823 AAH64823 Q8K448
BC156556 AAI56557 Q8K448
AF491842 AAM90895 Q8K448
AK034961 BAC28896 Q8K448
AK047188 BAC32984 Q8K448
AB097675 BAC66658 Q8K448
AK129463 BAC98273 Q8K448
AK138604 BAE23713 Q8K448
AK169879 BAE41431 Q8K448

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Abca5 NP_671752 R.norvegicus Abca5 286970   NP_775429 95
H.sapiens ABCA5 23461 Gene Info NP_061142 90
A.gambiae AgaP_AGAP010416 1272631   XP_311532 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)