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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Lsm10, U7 snRNP-specific Sm-like protein LSM10
Sequence ID:NM_001163266
NM_138721
Entrez Gene ID:116748
Ensembl ID:ENSMUSG00000050188

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 D2.2|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 126096714 - 126098581

 Exon Info From UCSC:
NM_001163266
NM_138721

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4489522Full LengthBC026476U7 snRNP-specific Sm-like protein LSM10
4989202Full LengthBC024543U7 snRNP-specific Sm-like protein LSM10

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_620046  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001163266 NP_001156738    
NM_138721 NP_620046 Q3UPL7
Q8QZX5
LSM

Related Sequences

 
mRNAGenPeptSwissProt
BC024543 AAH24543 Q3UPL7
Q8QZX5
BC026476 AAH26476 Q3UPL7
Q8QZX5
AK143443 BAE25378 Q3UPL7
Q8QZX5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lsm10 NP_620046 R.norvegicus Lsm10 366468   NP_001102446 99
H.sapiens LSM10 84967 Gene Info NP_116270 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)