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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ppp3r1, protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)
Sequence ID:NM_024459
Entrez Gene ID:19058
Ensembl ID:ENSMUSG00000033953

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, skin, soft tissue, spleen, stem cell, stomach, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11|11 A3.1

Chromosomal Position (from UCSC)

Chromosomal Position:11: 17151119 - 17198889

NM_024459 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12451705930017059544
2462851708210917082148
2864621709295917093135
4635221709421917094278
5237071709467117094855
70828291709826117100382

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_077779  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_024459 NP_077779   efhand

Related Sequences

 
mRNAGenPeptSwissProt
S43864 AAB23171 Q63810
AK133403 BAE21637 Q63810
AK145541 BAE26495 Q63810
AK160938 BAE36102 Q63810
AK163241 BAE37251 Q63810

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ppp3r1 NP_077779 R.norvegicus Ppp3r1 29748   NP_059005 100
H.sapiens PPP3R1 5534 Gene Info NP_000936 100
A.gambiae AgaP_AGAP004298 1274448   XP_313573 88
D.melanogaster CanB2 46456   NP_524874 88
D.melanogaster CanB 44317   NP_524741 86
C.elegans cnb-1 179572   NP_505885 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)