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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. -, Transcribed locus, strongly similar to NP_033509.1 lysine-specific demethylase 6A [Mus musculus]
Sequence ID:AK045533
Entrez Gene ID:22289
Ensembl ID:ENSMUSG00000037369

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Unknown

Chromosomal Position (from UCSC)

Chromosomal Position:X: 18274514 - 18278260


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6516368Full LengthBC053433ubiquitously transcribed tetratricopeptide repeat gene, X chromosome
5356391IncompleteBC027130ubiquitously transcribed tetratricopeptide repeat gene, X chromosome
30466975IncompleteBC075703ubiquitously transcribed tetratricopeptide repeat gene, X chromosome

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009483 NP_033509   TPR_1
JmjC

Related Sequences

 
mRNAGenPeptSwissProt
BC027130 AAH27130 Q8R2W5
BC053433 AAH53433 O70546
BC075703 AAH75703 O70546
AK162600 BAE36981 Q3TRP6
AK164248 BAE37703 Q3TPN3
AK164941 BAE37975 Q3TNW2
AJ002730 CAA05692 O70546

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Kdm6a NP_033509 R.norvegicus Kdm6a 100310845   XP_002730231 98
H.sapiens KDM6A 7403 Gene Info NP_066963 97
A.gambiae AgaP_AGAP008509 1277464   XP_316935 59
D.melanogaster Utx 34377   NP_001188773 59
C.elegans utx-1 181110   NP_509450 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)