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Gene Info

Gene Information For:Mm. Smarcc2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
Sequence ID:NM_001114096
NM_001114097
NM_198160
Entrez Gene ID:68094
Ensembl ID:ENSMUSG00000025369

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, testis, thymus, thyroid, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10 D3|10

Chromosomal Position (from UCSC)

Chromosomal Position:10: 128489128 - 128490173

 Exon Info From UCSC:
NM_001114096
NM_001114097
NM_198160

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5705438Full LengthBC058720SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
3493271IncompleteBC002250SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
4239046IncompleteBC040363SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
5686195IncompleteBC062102SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001114096 NP_001107568    
NM_001114097 NP_001107569 Q6PDG5  
NM_198160 NP_937803    

Related Sequences

 
mRNAGenPeptSwissProt
BC058720 AAH58720 Q6PDG5
BC062102 AAH62102 Q6PDG5
AK146971 BAE27576 Q3UID0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Smarcc2 NP_001107568 R.norvegicus LOC685179 685179   XP_002729813 98
H.sapiens SMARCC2 6601 Gene Info NP_001123892 97
D.melanogaster mor 41942   NP_001189230 53
A.gambiae AgaP_AGAP003118 1273789   XP_562883 52
C.elegans psa-1 180324   NP_507906 44
S.cerevisiae SWI3 853264   NP_012359 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)