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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Lgi3, leucine-rich repeat LGI family, member 3
Sequence ID:NM_145219
Entrez Gene ID:213469
Ensembl ID:ENSMUSG00000033595

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14 D2|14

Chromosomal Position (from UCSC)

Chromosomal Position:14: 70530838 - 70538011

NM_145219 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14507093062770931076
4515227093187470931945
5235947093258170932652
5956667093298370933054
6677387093315170933222
7399087093417570934344
90910737093448770934651
107431807093602370938129

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5686778Full LengthBC055315leucine-rich repeat LGI family, member 3
5686778Full LengthBC061460leucine-rich repeat LGI family, member 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_660254  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_145219 NP_660254 Q8K406 LRR_1
EPTP

Related Sequences

 
mRNAGenPeptSwissProt
BC055315 AAH55315 Q8K406
BC061460 AAH61460 Q8K406
AF515590 AAM55219 Q8K406
AY174077 AAO19739 Q8K406
AK049831 BAC33943 Q8K406
AK132296 BAE21087 Q3V1R3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lgi3 NP_660254 R.norvegicus Lgi3 306013   NP_001100747 99
H.sapiens LGI3 203190 Gene Info NP_644807 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)