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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ppif, peptidylprolyl isomerase F (cyclophilin F)
Sequence ID:NM_134084
Entrez Gene ID:105675
Ensembl ID:ENSMUSG00000021868

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14 A3|14

Chromosomal Position (from UCSC)

Chromosomal Position:14: 25699846 - 25700256

NM_134084 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12542651365526513908
2552852651495826514988
2863742651548926515577
3754712651705826517154
4725472651775126517826
54815472651895226519951

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3496285Full LengthBC004041peptidylprolyl isomerase F (cyclophilin F)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598845  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_134084 NP_598845 Q99KR7 EC 5.2.1.8 Pro_isomerase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC004041 AAH04041 Q99KR7 EC 5.2.1.8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ppif NP_598845 R.norvegicus Ppif 282819   NP_758443 99
H.sapiens PPIF 10105 Gene Info NP_005720 90
D.melanogaster Cyp1 32595   NP_523366 76
S.pombe ppi1 2540269   NP_595664 75
A.gambiae AgaP_AGAP000462 1271778   XP_310632 72
S.cerevisiae CPR1 851733   NP_010439 71
A.thaliana CYP20-2 831151   NP_001190299 70
N.crassa NCU00726 5847832   XP_001728468 59

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)