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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Rlbp1, retinaldehyde binding protein 1
Sequence ID:NM_001173483
NM_020599
Entrez Gene ID:19771
Ensembl ID:ENSMUSG00000039194

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 D3|7 39.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 79374870 - 79386717

 Exon Info From UCSC:
NM_001173483
NM_020599

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4481973Full LengthBC016268retinaldehyde binding protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_065624  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001173483 NP_001166954    
NM_020599 NP_065624 Q544Y3
Q9Z275
CRAL_TRIO
CRAL_TRIO_N

Related Sequences

 
mRNAGenPeptSwissProt
BC016268 AAH16268 Q544Y3
Q9Z275
AK014227 BAB29216 Q544Y3
Q9Z275
AK140622 BAE24430 Q544Y3
Q9Z275

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rlbp1 NP_001166954 R.norvegicus Rlbp1 293049   NP_001099744 98
H.sapiens RLBP1 6017 Gene Info NP_000317 91
D.melanogaster CG5958 34022   NP_609119 34
A.gambiae AgaP_AGAP009385 1271293   XP_559860 34
A.gambiae AgaP_AGAP009381 1271290   XP_310052 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)