Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ccl9, chemokine (C-C motif) ligand 9
Sequence ID:NM_011338
Entrez Gene ID:20308
Ensembl ID:ENSMUSG00000019122

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 C|11 47.4 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 83575351 - 83578483

NM_011338 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
125798338641883388996
258026888338934483389452
268927608338987683389947
276130088339189083392137

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8862340Full LengthBC139318chemokine (C-C motif) ligand 9
40131265Full LengthBC145962chemokine (C-C motif) ligand 9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035468  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011338 NP_035468 Q3U9T8
P51670
IL8

Related Sequences

 
mRNAGenPeptSwissProt
U15209 AAA92583 Q3U9T8
P51670
U49513 AAB02198 P51670
U19482 AAB17120 Q3U9T8
P51670
AF128195 AAF22536 Q3U9T8
P51670
AF128196 AAF22537 Q3U9T8
P51670
AF128197 AAF22538 Q3U9T8
P51670
AF128198 AAF22539 Q3U9T8
P51670
AF128199 AAF22540 Q3U9T8
P51670
AF128200 AAF22541 Q3U9T8
P51670
AF128201 AAF22542 Q3U9T8
P51670
AF128202 AAF22543 Q3U9T8
P51670
AF128203 AAF22544 Q3U9T8
P51670
AF128204 AAF22545 Q3U9T8
P51670
BC139318 AAI39319 Q3U9T8
BC145962 AAI45963 Q3U9T8
AK151131 BAE30139 Q3U9T8
P51670
AK151340 BAE30318 Q3UAJ6
AK151649 BAE30578 Q3U9T8
P51670
AK154511 BAE32640 Q3U9T8
P51670
AK154657 BAE32747 Q3U3N8
AK155032 BAE33004 Q3U9T8
P51670
AK155036 BAE33005 Q3U9T8
P51670

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ccl9 NP_035468 R.norvegicus Ccl9 360579   NP_001012357 74

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)