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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Cthrc1, collagen triple helix repeat containing 1
Sequence ID:NM_026778
Entrez Gene ID:68588
Ensembl ID:ENSMUSG00000054196

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15|15 C

Chromosomal Position (from UCSC)

Chromosomal Position:15: 39076935 - 39087119

NM_026778 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12283890847738908704
2294503891202838912249
4516673891581138916027
66811643891816838918664

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9053293Full LengthBC144745collagen triple helix repeat containing 1
40130184Full LengthBC131907collagen triple helix repeat containing 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026778 NP_081054 Q9D1D6  

Related Sequences

 
mRNAGenPeptSwissProt
BC131907 AAI31908 A2RRY6
BC144745 AAI44746 B7ZMQ8
AK003674 BAB22930 Q9D1D6
AK151282 BAE30268 Q9D1D6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cthrc1 NP_081054 R.norvegicus Cthrc1 282836   NP_758836 99
H.sapiens CTHRC1 115908 Gene Info NP_612464 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)