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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Vldlr, very low density lipoprotein receptor
Sequence ID:NM_001161420
NM_013703
Entrez Gene ID:22359
Ensembl ID:ENSMUSG00000024924

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19 C1|19 20.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:19: 27250082 - 27254220

 Exon Info From UCSC:
NM_001161420
NM_013703

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3968213Full LengthBC013622very low density lipoprotein receptor

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001161420 NP_001154892    
NM_013703 NP_038731 P98156  

Related Sequences

 
mRNAGenPeptSwissProt
U06670 AAA59384 P98156
L33417 AAC37668 P98156
BC013622 AAH13622 Q91YY0
AK136838 BAE23143 Q3UVX6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Vldlr NP_038731 R.norvegicus Vldlr 25696   NP_037287 99
H.sapiens VLDLR 7436 Gene Info NP_003374 96
D.melanogaster LpR1 2768687   NP_001163734 46
A.gambiae AgaP_AGAP002186 1269366   XP_307995 45
D.melanogaster LpR2 43105   NP_001097928 44
C.elegans T13C2.6 174116   NP_872023 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta