Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Slc32a1, Solute carrier family 32 (GABA vesicular transporter), member 1
Sequence ID:NM_009508
Entrez Gene ID:22348
Ensembl ID:ENSMUSG00000037771

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2|2 H1-3

Chromosomal Position (from UCSC)

Chromosomal Position:2: 158611200 - 158615662

NM_009508 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1874158436493158437366
8752805158439552158441482

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5686843Full LengthBC052020solute carrier family 32 (GABA vesicular transporter), member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033534  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009508 NP_033534 O35633 Aa_trans

Related Sequences

 
mRNAGenPeptSwissProt
BC052020 AAH52020 Q49S98
O35633
AY578289 AAT84437 Q49S98
O35633
AK140468 BAE24402 Q49S98
O35633
AK163661 BAE37446 Q49S98
O35633
AK163754 BAE37482 Q49S98
O35633
AK163929 BAE37540 Q3TQ45
AJ001598 CAA04864 O35633

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc32a1 NP_033534 R.norvegicus Slc32a1 83612   NP_113970 100
H.sapiens SLC32A1 140679 Gene Info NP_542119 99
D.melanogaster VGAT 36574   NP_610938 50
A.gambiae AgaP_AGAP011116 1270809   XP_309530 49
C.elegans unc-47 176431   NP_499255 43
S.cerevisiae AVT1 853457   NP_012534 27
A.thaliana AT3G54830 824648   NP_191043 27
N.crassa NCU06231 3879237   XP_963082 27
A.thaliana AT2G39130 818499   NP_850312 25

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)