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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Vps33a, vacuolar protein sorting 33A (yeast)
Sequence ID:NM_029929
Entrez Gene ID:77573
Ensembl ID:ENSMUSG00000029434

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 F|5 64.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 123530746 - 123572998

 Exon Info From UCSC:
NM_029929

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4501207Full LengthBC046417vacuolar protein sorting 33A (yeast)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_084205  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_029929 NP_084205 Q80XK7
Q9D2N9
Sec1

Related Sequences

 
mRNAGenPeptSwissProt
BC046417 AAH46417 Q80XK7
AF439858 AAL33578 Q9D2N9
AK019463 BAB31735 Q9D2N9
AK041982 BAC31121 Q9D2N9
AK140553 BAE24421 Q9D2N9
AK150282 BAE29438 Q9D2N9
AK150550 BAE29652 Q9D2N9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Vps33a NP_084205 R.norvegicus Vps33a 65081   NP_075250 99
H.sapiens VPS33A 65082 Gene Info NP_075067 98
A.gambiae AgaP_AGAP003203 1273876   XP_312907 51
D.melanogaster car 32947   NP_523410 46
A.thaliana ATVPS33 824651   NP_001154679 40
N.crassa NCU09121 3875041   XP_958893 40
S.pombe vps33 2539880   NP_596210 35
P.falciparum PFI1700c 813620   XP_001352216 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta