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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Cacnb1, calcium channel, voltage-dependent, beta 1 subunit
Sequence ID:NM_001159319
NM_001159320
NM_031173
NM_145121
Entrez Gene ID:12295
Ensembl ID:ENSMUSG00000020882

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 D|11 58.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 98002900 - 98022611

 Exon Info From UCSC:
NM_001159319
NM_001159320
NM_031173
NM_145121

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30288369Full LengthBC077713calcium channel, voltage-dependent, beta 1 subunit

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_112450  NP_660099  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001159319 NP_001152791    
NM_001159320 NP_001152792    
NM_031173 NP_112450   Ca_channel_B
NM_145121 NP_660099 Q8R3Z5 Ca_channel_B

Related Sequences

 
mRNAGenPeptSwissProt
AF068898 AAC19386 Q8R3Z5
AF322905 AAG42829 Q8R3Z5
BC077713 AAH77713 Q6DD95
AY094172 AAM11473 Q8R3Z5
AY094173 AAM11474 Q8R3Z5
AK155193 BAE33107 Q3U2N3
AB685743 BAM15629 I2FKE4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cacnb1 NP_660099 R.norvegicus Cacnb1 50688   NP_059042 99
H.sapiens CACNB1 782 Gene Info NP_000714 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)