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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tnfsf9, tumor necrosis factor (ligand) superfamily, member 9
Sequence ID:NM_009404
Entrez Gene ID:21950
Ensembl ID:ENSMUSG00000035678

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 D|17

Chromosomal Position (from UCSC)

Chromosomal Position:17: 57105384 - 57107757

NM_009404 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14765724480757245282
4775135724567257245708
51412305724646357247179

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861789Full LengthBC138767tumor necrosis factor (ligand) superfamily, member 9
8861792Full LengthBC138770tumor necrosis factor (ligand) superfamily, member 9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033430  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009404 NP_033430 Q3U1Z9
P41274
TNF

Related Sequences

 
mRNAGenPeptSwissProt
BC138767 AAI38768 Q3U1Z9
BC138770 AAI38771 Q3U1Z9
AK155610 BAE33344 Q3U1Z9
P41274
AK169471 BAE41192 Q3TEQ6

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta