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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Fa2h, fatty acid 2-hydroxylase
Sequence ID:NM_178086
Entrez Gene ID:338521
Ensembl ID:ENSMUSG00000033579

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 E1|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 111347469 - 111393818

NM_178086 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11384113869037113870420
13851637113871830113872082
16381810113873103113873275
18111917113879299113879405
19182060113879977113880119
20612153113890293113890385
21542492113917382113917720

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40104374Full LengthBC128080fatty acid 2-hydroxylase
40104375Full LengthBC128081fatty acid 2-hydroxylase
4208853IncompleteBC026400fatty acid 2-hydroxylase
4983638IncompleteBC026629fatty acid 2-hydroxylase
6476561IncompleteBC046985fatty acid 2-hydroxylase
40052726IncompleteBC111912fatty acid 2-hydroxylase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_835187  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_178086 NP_835187 Q5MPP0 Cyt-b5
FA_hydroxylase

Related Sequences

 
mRNAGenPeptSwissProt
BC026400 AAH26400 Q5MPP0
BC026629 AAH26629 Q5MPP0
BC046985 AAH46985 Q5MPP0
BC111912 AAI11913 Q5MPP0
BC128080 AAI28081 Q5MPP0
BC128081 AAI28082 Q5MPP0
AY660882 AAV70494 Q5MPP0
AK090338 BAC41174 Q5MPP0
AK161502 BAE36428 Q5MPP0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Fa2h NP_835187 R.norvegicus Fa2h 307855   NP_001129055 94
H.sapiens FA2H 79152 Gene Info NP_077282 83
A.thaliana FAH2 827835   NP_193819 46
A.thaliana FAH1 818042   NP_181023 46
C.elegans C25A1.5 172882   NP_492678 45
D.melanogaster CG30502 35670   NP_610279 43
N.crassa NCU03492 3872026   XP_955879 39
S.cerevisiae SCS7 855315   NP_013999 38
S.pombe SPAC19G12.08 2542519   NP_594423 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)