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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Alox5, arachidonate 5-lipoxygenase
Sequence ID:NM_009662
Entrez Gene ID:11689
Ensembl ID:ENSMUSG00000025701

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 F1|6 53.2 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 116410637 - 116461131

 Exon Info From UCSC:
NM_009662

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8862124Full LengthBC139102arachidonate 5-lipoxygenase
9055825Full LengthBC141213arachidonate 5-lipoxygenase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033792  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_009662 NP_033792 P48999 EC 1.13.11.34 Lipoxygenase
PLAT

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
L42198 AAC37673 P48999 EC 1.13.11.34
BC049768 AAH49768 Q810M3  
BC139102 AAI39103 P48999 EC 1.13.11.34
BC141213 AAI41214 P48999 EC 1.13.11.34
AK137481 BAE23373 P48999 EC 1.13.11.34
AK170879 BAE42089 Q3TC68  
AK171191 BAE42301 Q3TBK8  
AK171413 BAE42439 P48999 EC 1.13.11.34

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Alox5 NP_033792 R.norvegicus Alox5 25290   NP_036954 98
H.sapiens ALOX5 240 Gene Info NP_000689 93
A.thaliana LOX5 821808   NP_188879 34
A.thaliana LOX1 841944   NP_175900 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta