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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Hpgds, hematopoietic prostaglandin D synthase
Sequence ID:NM_019455
Entrez Gene ID:54486
Ensembl ID:ENSMUSG00000029919

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6|6 D-E

Chromosomal Position (from UCSC)

Chromosomal Position:6: 65119689 - 65144730

NM_019455 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
227966506728765070081
279728956507355165073649
289630056508208365082192
300630986508559465085686
309932406508815865088299
324132986509466665094723

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40126054Full LengthBC116735prostaglandin D2 synthase 2, hematopoietic
40126056Full LengthBC116737prostaglandin D2 synthase 2, hematopoietic

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062328  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_019455 NP_062328 Q9JHF7 EC 2.5.1.18
EC 5.3.99.2
GST_C
GST_N

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC116735 AAI16736 Q9JHF7 EC 2.5.1.18
EC 5.3.99.2
BC116737 AAI16738 Q9JHF7 EC 2.5.1.18
EC 5.3.99.2
D82072 BAA96845 Q9JHF7 EC 2.5.1.18
EC 5.3.99.2
AK020246 BAB32037 Q9JHF7 EC 2.5.1.18
EC 5.3.99.2
AK039392 BAC30336 Q9JHF7 EC 2.5.1.18
EC 5.3.99.2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hpgds NP_062328 R.norvegicus Hpgds 58962   NP_113832 94
H.sapiens HPGDS 27306 Gene Info NP_055300 80
C.elegans gst-15 185410   NP_496860 51
C.elegans gst-29 190225   NP_497118 41
C.elegans gst-28 190224   NP_497117 41
C.elegans gst-39 190226   NP_497119 40
C.elegans gst-27 175166   NP_497116 40
C.elegans gst-37 189575   NP_503532 40
C.elegans gst-26 190223   NP_497115 40
D.melanogaster GstS1 36927   NP_523767 40
C.elegans gst-4 177886   NP_501848 40
C.elegans gst-20 175008   NP_496858 40
C.elegans gst-31 190228   NP_497121 40
C.elegans gst-24 185407   NP_496859 39
C.elegans gst-32 190230   NP_497123 39
C.elegans gst-5 187537   NP_496357 39
C.elegans gst-18 185412   NP_496866 38
C.elegans gst-14 185409   NP_496861 38
C.elegans gst-12 185408   NP_496862 37
C.elegans gst-33 178771   NP_503968 37
C.elegans gst-13 188915   NP_495967 37
C.elegans gst-7 173842   NP_494883 37
C.elegans gst-16 175009   NP_496863 37
C.elegans gst-2 177884   NP_501847 36
A.gambiae GST_ANOGA 1272645   XP_311546 36
C.elegans gst-3 177883   NP_501846 36
C.elegans gst-30 191347   NP_494902 36
C.elegans gst-8 184364   NP_494884 35
C.elegans gst-6 173841   NP_494882 34
C.elegans gst-38 185299   NP_506983 34
C.elegans gst-9 187615   NP_001022266 34
C.elegans gst-19 175010   NP_496864 34
C.elegans gst-35 259481   NP_741061 34
C.elegans gst-36 187645   NP_509652 33
C.elegans gst-21 191412   NP_503492 33
C.elegans gst-34 260015   NP_741060 33
C.elegans gst-22 180088   NP_507095 32
C.elegans gst-17 185411   NP_496865 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta