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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Slc4a4, solute carrier family 4 (anion exchanger), member 4
Sequence ID:NM_001136260
NM_001197147
NM_018760
Entrez Gene ID:54403
Ensembl ID:ENSMUSG00000060961

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5|5 E2

Chromosomal Position (from UCSC)

Chromosomal Position:5: 88887296 - 89235538

 Exon Info From UCSC:
NM_001136260
NM_018760

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40110074Full LengthBC148292solute carrier family 4 (anion exchanger), member 4
100068154Full LengthBC167254solute carrier family 4 (anion exchanger), member 4
4235872IncompleteBC049236solute carrier family 4 (anion exchanger), member 4
4973987IncompleteBC026592solute carrier family 4 (anion exchanger), member 4
40110066IncompleteBC129864solute carrier family 4 (anion exchanger), member 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_061230  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001136260 NP_001129732    
NM_001197147 NP_001184076    
NM_018760 NP_061230 O88343 HCO3_cotransp
Band_3_cyto

Related Sequences

 
mRNAGenPeptSwissProt
AF020195 AAC40160 O88343
AF141934 AAD31036 O88343
BC026592 AAH26592 O88343
BC129864 AAI29865 A2VDF7
BC148292 AAI48293 A7E1Z5
BC167254 AAI67254  
HQ018820 ADM25849 E1AWU4
HQ204220 ADN95183 A7E1Z5
HQ285250 ADP37962 E3VWA1
AK085387 BAC39437 O88343
AK140443 BAE24389 O88343

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc4a4 NP_061230 R.norvegicus Slc4a4 84484   NP_445876 99
H.sapiens SLC4A4 8671 Gene Info NP_001091954 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)