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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Txnip, thioredoxin interacting protein
Sequence ID:NM_001009935
NM_023719
Entrez Gene ID:56338
Ensembl ID:ENSMUSG00000038393

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3 F2.2|3 47.1 cM

Chromosomal Position (from UCSC)

Chromosomal Position:3: 96558189 - 96560756

 Exon Info From UCSC:
NM_001009935
NM_023719

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3591421Full LengthBC031850thioredoxin interacting protein
4193517Full LengthBC011212thioredoxin interacting protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001009935  NP_076208  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001009935 NP_001009935 Q8BG60 Arrestin_N
Arrestin_C
NM_023719 NP_076208   Arrestin_N
Arrestin_C

Related Sequences

 
mRNAGenPeptSwissProt
AF173681 AAD48499 Q8BG60
AF282826 AAG32666 Q8BG60
BC011212 AAH11212 Q91X82
BC031850 AAH31850 Q8BG60
AK004653 BAB23444 Q8BG60
AK082476 BAC38504 Q8BG60
AK088870 BAC40625 Q8BG60
AK089304 BAC40834 Q8BG60
AK089351 BAC40850 Q8BG60
AK089403 BAC40868 Q8BG60
AK155517 BAE33304 Q8BG60
AK171205 BAE42311 Q8BG60
AK171312 BAE42386 Q8BG60
AK171425 BAE42444 Q8BG60
AK171456 BAE42465 Q8BG60
AK171464 BAE42470 Q8BG60
AK171527 BAE42508 Q8BG60

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Txnip NP_001009935 R.norvegicus Txnip 117514   NP_001008767 99
H.sapiens TXNIP 10628 Gene Info NP_006463 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)