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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cd7, CD7 antigen
Sequence ID:NM_009854
Entrez Gene ID:12516
Ensembl ID:ENSMUSG00000025163

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 E2|11 74.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 121036753 - 121039431

NM_009854 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1400120898064120898463
401537120898993120899129
538852120899349120899663
853978120900606120900731

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4985794Full LengthBC024376CD7 antigen

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033984  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009854 NP_033984 P50283
Q3U4A8
V-set

Related Sequences

 
mRNAGenPeptSwissProt
BC024376 AAH24376 Q8R1M4
D10329 BAA01171 P50283
Q3U4A8
AK136444 BAE22981 P50283
Q3U4A8
AK154339 BAE32525 P50283
Q3U4A8
CT010368 CAJ18575 Q8R1M4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cd7 NP_033984 R.norvegicus Cd7 303747   NP_001100544 82
H.sapiens CD7 924 Gene Info NP_006128 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)