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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hcls1, hematopoietic cell specific Lyn substrate 1
Sequence ID:NM_008225
Entrez Gene ID:15163
Ensembl ID:ENSMUSG00000022831

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16|16 B

Chromosomal Position (from UCSC)

Chromosomal Position:16: 36934995 - 36951151

 Exon Info From UCSC:
NM_008225

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3593456Full LengthBC007469hematopoietic cell specific Lyn substrate 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032251  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008225 NP_032251 P49710
Q542G0
SH3_1
HS1_rep

Related Sequences

 
mRNAGenPeptSwissProt
BC007469 AAH07469 P49710
D42120 BAA07701 P49710
Q542G0
AK040049 BAC30501 Q8CA06
AK088723 BAC40528 P49710
Q542G0
AK132608 BAE21259 Q3V192
X84797 CAA59265 P49710
Q542G0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hcls1 NP_032251 R.norvegicus Hcls1 288077   NP_001011898 95
H.sapiens HCLS1 3059 Gene Info NP_005326 86
D.melanogaster Cortactin 42491   NP_524426 48
A.gambiae AgaP_AGAP004625 1275906   XP_557457 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)