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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Shroom2, shroom family member 2
Sequence ID:NM_172441
Entrez Gene ID:110380
Ensembl ID:ENSMUSG00000045180

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:X F2-F3|X 65.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:X: 152609999 - 152644421

NM_172441 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13286149044051149047336
32873559149047937149048209
35603722149051735149051897
37234268149053443149053988
42694478149057668149057877
44794579149091966149092066
45807034149093806149096260
70357166149108074149108205
71677318149130182149130333
73197494149203828149204003

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30532206IncompleteBC092373apical protein, Xenopus laevis-like
100069314BC172747shroom family member 2

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_172441 NP_766029    

Related Sequences

 
mRNAGenPeptSwissProt
BC172747 AAI72747  
DQ358971 ABD19518 A2ALU4
EF071946 ABO09922 A7TU71
AK029338 BAC26404 A2ALU4
AK032256 BAC27781 A2ALU4
AK049833 BAC33944 Q8C7N5
AK049850 BAC33957 A2ALU4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Shroom2 NP_766029 R.norvegicus Shroom2 317435   NP_001041358 94
H.sapiens SHROOM2 357 Gene Info NP_001640 63

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)