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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Atf6b, activating transcription factor 6 beta
Sequence ID:NM_017406
Entrez Gene ID:12915
Ensembl ID:ENSMUSG00000015461

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 B1|17 18.85 cM

Chromosomal Position (from UCSC)

Chromosomal Position:17: 34647199 - 34655072

 Exon Info From UCSC:
NM_017406

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4239106Full LengthBC013534activating transcription factor 6 beta
6395626Full LengthBC052635activating transcription factor 6 beta

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_059102  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017406 NP_059102 O35451
Q3UJ07
bZIP_1

Related Sequences

 
mRNAGenPeptSwissProt
BC013534 AAH13534 O35451
Q3UJ07
BC052635 AAH52635 O35451
Q3UJ07
AK143765 BAE25530 O35451
Q3UJ07
AK146671 BAE27348 O35451
Q3UJ07
AK159169 BAE34870 Q3TXP5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Atf6b NP_059102 R.norvegicus Atf6b 406169   NP_001002809 96
H.sapiens ATF6B 1388 Gene Info NP_001129625 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)