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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Usp6nl, USP6 N-terminal like
Sequence ID:NM_001080548
NM_181399
Entrez Gene ID:98910
Ensembl ID:ENSMUSG00000039046

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 A1|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 6322262 - 6323080

 Exon Info From UCSC:
NM_001080548
NM_181399

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_852064  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001080548 NP_001074017 Q80XC3  
NM_181399 NP_852064   TBC

Related Sequences

 
mRNAGenPeptSwissProt
AK005972 BAB24347 Q9DAB9
AK129037 BAC97847 Q80XC3
AK155073 BAE33027 Q80XC3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Usp6nl NP_852064 R.norvegicus Usp6nl 291309   NP_001099590 91
H.sapiens USP6NL 9712 Gene Info NP_001073960 82
A.gambiae AgaP_AGAP003341 1275017   XP_314237 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)