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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Rho, rhodopsin
Sequence ID:NM_145383
Entrez Gene ID:212541
Ensembl ID:ENSMUSG00000030324

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 E3|6 51.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 115938354 - 115940034

NM_145383 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1439115881944115882382
440608115883874115884042
609774115885126115885291
7751014115885413115885652
10153236115886626115888847

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4500760Full LengthBC013125rhodopsin
4527040Full LengthBC031766rhodopsin
4482012IncompleteBC094460rhodopsin

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_145383 NP_663358 P15409 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
BC013125 AAH13125 P15409
BC031766 AAH31766 P15409
AK044333 BAC31871 P15409
AK044412 BAC31908 P15409
AK164314 BAE37732 Q3TPK4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rho NP_663358 R.norvegicus Rho 24717   NP_254276 97
H.sapiens RHO 6010 Gene Info NP_000530 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)