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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Smarcb1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
Sequence ID:NM_001161853
NM_011418
Entrez Gene ID:20587
Ensembl ID:ENSMUSG00000000902

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 C1|10

Chromosomal Position (from UCSC)

Chromosomal Position:10: 75921211 - 75922541

 Exon Info From UCSC:
NM_001161853
NM_011418

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3154501Full LengthBC025163SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001161853 NP_001155325    
NM_011418 NP_035548 Q6ZWP4
Q9Z0H3
SNF5

Related Sequences

 
mRNAGenPeptSwissProt
BC025163 AAH25163 Q6ZWP4
Q9Z0H3
AB041578 BAA95062 Q9JJD1
AB017343 BAB12427 Q9ESU1
AB017344 BAB12428 Q9ESU0
AK075906 BAC36045 Q6ZWP4
Q9Z0H3
AK145552 BAE26504 Q3UDA4
AK150169 BAE29357 Q3UDA4
AJ011739 CAA09760 Q6ZWP4
Q9Z0H3
AJ011740 CAA09761 Q6ZWP4
Q9Z0H3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Smarcb1 NP_035548 H.sapiens SMARCB1 6598 Gene Info NP_003064 100
R.norvegicus Smarcb1 361825   NP_001020899 100
A.gambiae AgaP_AGAP001154 1282012   XP_322006 71
D.melanogaster Snr1 40657   NP_730935 68
C.elegans R07E5.3 175571   NP_497890 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta