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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tbxas1, thromboxane A synthase 1, platelet
Sequence ID:NM_011539
Entrez Gene ID:21391
Ensembl ID:ENSMUSG00000029925

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 F1-pter|6 20.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 38875403 - 38952973

 Exon Info From UCSC:
NM_011539

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5007629Full LengthBC029014thromboxane A synthase 1, platelet

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035669  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_011539 NP_035669 P36423 EC 5.3.99.5 p450

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
L18868 AAB39850 P36423 EC 5.3.99.5
BC029014 AAH29014 Q8K320  
AK139479 BAE24030 Q3UTF0  
AK162394 BAE36891 Q3TRY5  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tbxas1 NP_035669 R.norvegicus Tbxas1 24886   NP_036819 87
H.sapiens TBXAS1 6916 Gene Info NP_001159725 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta