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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Kcna1, potassium voltage-gated channel, shaker-related subfamily, member 1
Sequence ID:NM_010595
Entrez Gene ID:16485
Ensembl ID:ENSMUSG00000047976

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 F1-F3|6 61.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 126637796 - 126640104

NM_010595 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
17424126586480126593903
74258970126594273126595818

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40048563Full LengthBC112970potassium voltage-gated channel, shaker-related subfamily, member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034725  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010595 NP_034725 Q8CA58
P16388
Ion_trans
K_tetra

Related Sequences

 
mRNAGenPeptSwissProt
BC112970 AAI12971 Q2KHP0
AK039559 BAC30383 Q8CA58
AK158065 BAE34346 Q3TZ64
Y00305 CAA68408 P16388

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Kcna1 NP_034725 R.norvegicus Kcna1 24520   NP_775118 99
H.sapiens KCNA1 3736 Gene Info NP_000208 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)