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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Exoc1, exocyst complex component 1
Sequence ID:NM_027270
Entrez Gene ID:69940
Ensembl ID:ENSMUSG00000036435

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, peripheral nervous system, pineal gland, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, synovium, testis, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 E1|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 76561469 - 76570293

 Exon Info From UCSC:
NM_027270

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3661758Full LengthBC024678exocyst complex component 1
5686167Full LengthBC064811exocyst complex component 1
6334680Full LengthBC087543exocyst complex component 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_027270 NP_081546    

Related Sequences

 
mRNAGenPeptSwissProt
BC024678 AAH24678 Q8R3S6
BC064811 AAH64811 Q6P1Y9
BC087543 AAH87543 Q5PPR2
AK155980 BAE33534 Q3U1G4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Exoc1 NP_081546 H.sapiens EXOC1 55763 Gene Info NP_001020095 97
D.melanogaster sec3 39940   NP_648976 44
A.gambiae AgaP_AGAP012417 1280298   XP_551765 42
C.elegans sec-3 180598   NP_508530 37
A.thaliana SEC3A 841164   NP_001185163 26
A.thaliana SEC3B 841165   NP_175187 26

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)