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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Col4a4, collagen, type IV, alpha 4
Sequence ID:NM_007735
Entrez Gene ID:12829
Ensembl ID:ENSMUSG00000067158

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 C5|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 82452557 - 82586792

 Exon Info From UCSC:
NM_007735

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031761  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007735 NP_031761 Q9QZR9 Collagen
C4

Related Sequences

 
mRNAGenPeptSwissProt
AF169388 AAD50450 Q9QZR9
BC117709 AAI17710 Q9QZR9
AK053338 BAC35352 Q8BPT9
AK142553 BAE25102 Q3UQE0
Z35167 CAA84530 Q9QZR9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Col4a4 NP_031761 H.sapiens COL4A4 1286 Gene Info NP_000083 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta