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Gene Info

Gene Information For:Mm. Cops5, COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)
Sequence ID:NM_013715
Entrez Gene ID:26754
Ensembl ID:ENSMUSG00000025917

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1 A2|1 3.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 10024830 - 10037898

NM_013715 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
212531001491110015143
2544021001718310017331
4035141002067910020790
5156001002241910022504
6016661002333810023403
6677951002408810024216
79610301002500910025243
103112591002775010027978

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5693100Full LengthBC046753COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038743  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013715 NP_038743 O35864 Mov34

Related Sequences

 
mRNAGenPeptSwissProt
AF065386 AAC17179 O35864
U70736 AAD03470 O35864
AF068223 AAF61318 O35864
BC046753 AAH46753 O35864
AK012499 BAB28282 O35864
AK133073 BAE21497 Q3V0K7
AK146271 BAE27030 O35864
AK151492 BAE30445 O35864

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cops5 NP_038743 R.norvegicus Cops5 312916   NP_001020866 100
H.sapiens COPS5 10987 Gene Info NP_006828 99
D.melanogaster CSN5 42000   NP_477442 76
A.gambiae AgaP_AGAP002880 1273087   XP_312032 73
A.thaliana CSN5B 843463   NP_177279 69
A.thaliana CSN5A 838899   NP_173705 68
C.elegans csn-5 177342   NP_500841 60
N.crassa NCU00467 3872933   XP_956786 53

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)