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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Ndn, necdin
Sequence ID:NM_010882
Entrez Gene ID:17984
Ensembl ID:ENSMUSG00000033585

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7 C|7 28.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 62348319 - 62349922

NM_010882 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9056296Full LengthBC147249necdin
9056298Full LengthBC147250necdin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035012  

Protein Infomation

NM_010882 NP_035012 P25233 MAGE

Related Sequences

M80840 AAA39805 P25233
BC147249 AAI47250 P25233
BC147250 AAI47251 P25233
AK005078 BAB23802 P25233
AK075729 BAC35914 P25233
AK075735 BAC35917 P25233
AK076025 BAC36130 P25233
AK078129 BAC37140 Q8C5K8
AK135444 BAE22535 P25233
AK149086 BAE28734 P25233

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Ndn NP_035012 R.norvegicus Ndn 308690   NP_001008558 96
H.sapiens NDN 4692 Gene Info NP_002478 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)