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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Gjc2, Gap junction protein, gamma 2
Sequence ID:NM_175452
NM_080454
Entrez Gene ID:118454
Ensembl ID:ENSMUSG00000043448

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B1.3|11 34.0

Chromosomal Position (from UCSC)

Chromosomal Position:11: 59175567 - 59182826

 Exon Info From UCSC:
NM_175452
NM_080454

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40046961Full LengthBC113759gap junction protein, gamma 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_780661  NP_536702  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_080454 NP_536702 Q8BQU6 Connexin
NM_175452 NP_780661   Connexin

Related Sequences

 
mRNAGenPeptSwissProt
BC113759 AAI13760 Q2HJ05
AY394498 AAR05823 Q8BQU6
AY394499 AAR05824 Q8BQU6
AY394500 AAR05825 Q8BQU6
AK046421 BAC32722 Q8BQU6
AK046609 BAC32806 Q8BQU6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gjc2 NP_536702 R.norvegicus Gjc2 497913   XP_002727761 98
H.sapiens GJC2 57165 Gene Info NP_065168 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)