Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cox6b1, cytochrome c oxidase, subunit VIb polypeptide 1
Sequence ID:XM_003946224
NM_025628
Entrez Gene ID:110323
Ensembl ID:ENSMUSG00000036751

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7 B1|7 10.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 30616973 - 30626151

NM_025628 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11893140199231402180
1902903140843331408533
2914043140951831409631
4055053141106931411169

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4989436Full LengthBC024343cytochrome c oxidase, subunit VIb polypeptide 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079904  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025628 NP_079904 P56391 COX6B

Related Sequences

 
mRNAGenPeptSwissProt
BC024343 AAH24343 P56391
AK007996 BAB25398 P56391
AK012686 BAB28411 P56391
AK018721 BAB31367 P56391
XM_003946224 XP_003946273  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cox6b1 NP_079904 R.norvegicus LOC688869 688869   NP_001138745 100
H.sapiens COX6B1 1340 Gene Info NP_001854 85
D.melanogaster CG14235 32989   NP_728294 58
N.crassa NCU11339 3879674   XP_963513 52
S.pombe cox12 2538835   NP_588322 51
S.cerevisiae COX12 850727   NP_013139 49
A.thaliana COX6B 838851   NP_173661 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)