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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Lrrn3, Leucine rich repeat protein 3, neuronal
Sequence ID:NM_010733
Entrez Gene ID:16981
Ensembl ID:ENSMUSG00000036295

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12|12 B3

Chromosomal Position (from UCSC)

Chromosomal Position:12: 41452169 - 41485953

NM_010733 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
5430574217825442181257
305832384221215742212337

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5698788Full LengthBC069041leucine rich repeat protein 3, neuronal

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034863  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001271708 NP_001258637    
NM_001271709 NP_001258638    
NM_010733 NP_034863 Q8CBC6 LRR_1
LRRCT
I-set

Related Sequences

 
mRNAGenPeptSwissProt
BC069041 AAH69041 Q8CBC6
D49802 BAA08622 Q8CBC6
AK036316 BAC29381 Q8CBC6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lrrn3 NP_034863 R.norvegicus Lrrn3 81514   NP_110483 95
H.sapiens LRRN3 54674 Gene Info NP_001093128 88
A.gambiae AgaP_AGAP011371 1278325   XP_317948 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)