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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cpne5, copine V
Sequence ID:NM_153166
Entrez Gene ID:240058
Ensembl ID:ENSMUSG00000024008

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 A3.3|17

Chromosomal Position (from UCSC)

Chromosomal Position:17: 29157914 - 29237715

 Exon Info From UCSC:
NM_153166

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4527212Full LengthBC036971copine V

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_694806  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_153166 NP_694806 Q8JZW4 C2
Copine

Related Sequences

 
mRNAGenPeptSwissProt
BC036971 AAH36971 Q8JZW4
AK044042 BAC31750 Q8JZW4
AK079192 BAC37574 Q8BVA1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cpne5 NP_694806 R.norvegicus Cpne5 309650   NP_001101086 100
H.sapiens CPNE5 57699 Gene Info NP_065990 98
C.elegans T28F3.1 178508   NP_872104 49
C.elegans gem-4 178108   NP_502225 48

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)