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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Lrrtm2, leucine rich repeat transmembrane neuronal 2
Sequence ID:NM_178005
Entrez Gene ID:107065
Ensembl ID:ENSMUSG00000071862

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18 B1|18

Chromosomal Position (from UCSC)

Chromosomal Position:18: 35211833 - 35215018

NM_178005 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
752413536866235373896
524256733537424635374677

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100015001Full LengthBC146465leucine rich repeat transmembrane neuronal 2
100014484BC140381leucine rich repeat transmembrane neuronal 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_821072  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_178005 NP_821072 Q8BGA3 LRR_1

Related Sequences

 
mRNAGenPeptSwissProt
BC140381 AAI40382  
BC146465 AAI46466  
AY182027 AAO67548 Q8BGA3
AK043173 BAC31484 Q8BGA3
AK043784 BAC31653 Q8BGA3
AK044705 BAC32042 Q8BGA3
AK046774 BAC32862 Q8C8L1
AK046818 BAC32883 Q8BGA3
AK049920 BAC33985 Q8BGA3
AK122278 BAC65560 Q8BGA3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lrrtm2 NP_821072 R.norvegicus Lrrtm2 685472   NP_001102939 99
H.sapiens LRRTM2 26045   NP_056379 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)