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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Skint1, selection and upkeep of intraepithelial T cells 1
Sequence ID:NM_001102662
Entrez Gene ID:639781
Ensembl ID:ENSMUSG00000089773

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 D1|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 112006281 - 112012345

NM_001102662 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
175111678873111678947
76156111683277111683357
157504111691564111691911
505786111693901111694182
787897111698071111698181
8981005111700828111700935
10061128111701407111701529
11291260111702011111702142

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001102662 NP_001096132 A7TZE6  

Related Sequences

 
mRNAGenPeptSwissProt
EF494889 ABS30711 A7TZE6
EF494890 ABS30712 A7TZE6
EF494891 ABS30713 A7TZE6
EU099296 ABU87894 A7TZE6
EU099297 ABU87895 A7TZE6
EU099298 ABU87896 A7TZE6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Skint1 NP_001096132 R.norvegicus Skint1 689801   NP_001129388 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)