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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Lrp12, low density lipoprotein-related protein 12
Sequence ID:NM_172814
Entrez Gene ID:239393
Ensembl ID:ENSMUSG00000022305

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15 B3.1|15

Chromosomal Position (from UCSC)

Chromosomal Position:15: 39870602 - 39943757

NM_172814 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
122763970214839704423
227724093970763239707764
241035143970934039710444
351537173971166539711867
371838533971655139716686
385439103973608439736140
391140643977514939775302

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6822657Full LengthBC058345low density lipoprotein-related protein 12
3376292IncompleteBC039793low density lipoprotein-related protein 12

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_766402  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_172814 NP_766402 Q8BUJ9 Ldl_recept_a
CUB

Related Sequences

 
mRNAGenPeptSwissProt
BC058345 AAH58345 Q8BUJ9
AK050512 BAC34299 Q8BUJ9
AK084675 BAC39247 Q8BUJ9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lrp12 NP_766402 R.norvegicus Lrp12 314941   NP_001128355 97
H.sapiens LRP12 29967 Gene Info NP_038465 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)