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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Col6a5, collagen, type VI, alpha 5
Sequence ID:NM_001167923
Entrez Gene ID:665033
Ensembl ID:ENSMUSG00000091345

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 F1|9

Chromosomal Position (from UCSC)

Chromosomal Position:9: 105856069 - 105861988

 Exon Info From UCSC:
NM_001167923

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001167923 NP_001161395    

Related Sequences

 
mRNAGenPeptSwissProt
AM748256 CAO01891 A6H584
AM748257 CAO01892 A6H584
AM748258 CAO01893 A6H584

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Col6a5 NP_001161395 R.norvegicus RGD1565804 501047   XP_576462 90
H.sapiens COL6A5 256076 Gene Info NP_694996 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)