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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ubl4, ubiquitin-like 4
Sequence ID:NM_145405
NR_045779
Entrez Gene ID:27643
Ensembl ID:ENSMUSG00000015290

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, pancreas, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:X A7.3|X 29.9 cM

Chromosomal Position (from UCSC)

Chromosomal Position:X: 74367454 - 74368506

NM_145405 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
172027161273971612924
2034117161303971613247
4125177161349171613596
5186297161375471613865

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4215699Full LengthBC010817ubiquitin-like 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_663380  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_145405 NP_663380 P21126
Q3UK94
ubiquitin

Related Sequences

 
mRNAGenPeptSwissProt
BC010817 AAH10817 P21126
Q3UK94
EU599043 ACC61066 B2M0R9
EU599044 ACC61067 B2M0S0
EU599045 ACC61068 B2M0S1
AK146110 BAE26908 P21126
Q3UK94
AJ627038 CAF25307 Q684Q9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ubl4 NP_663380 R.norvegicus Ubl4a 293864   NP_001099816 98
H.sapiens UBL4A 8266 Gene Info NP_055050 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)