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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Rab2a, RAB2A, member RAS oncogene family
Sequence ID:NM_021518
Entrez Gene ID:59021
Ensembl ID:ENSMUSG00000047187

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:4 A1|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 8535862 - 8606503

NM_021518 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
126584627908463054
26633784882988488369
33840584996728499739
40648885051018505183
48958185056178505709
58269385095288509639
69476285315208531588
763205785335548534848

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6820798Full LengthBC058382RAB2A, member RAS oncogene family

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_067493  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021518 NP_067493 P53994 Ras

Related Sequences

 
mRNAGenPeptSwissProt
BC058382 AAH58382 Q6PDZ3
AK042862 BAC31385 Q8BXY4
AK079071 BAC37524 P53994
AK135421 BAE22525 P53994
AK146179 BAE26957 P53994
AK150030 BAE29254 P53994
AK159607 BAE35226 P53994
AK160333 BAE35742 P53994
AK163320 BAE37298 P53994
AB232585 BAF02847 Q0PD65
X95403 CAA64684 P53994

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rab2a NP_067493 H.sapiens RAB2A 5862 Gene Info NP_002856 99
R.norvegicus Rab2a 65158   NP_113906 99
A.gambiae AgaP_AGAP005393 1276094   XP_556035 91
D.melanogaster Rab2 35577   NP_477090 90
C.elegans unc-108 171956   NP_491233 89
A.thaliana RABB1C 827428   NP_193450 79
P.falciparum Rab2 811352   XP_001350706 77
N.crassa NCU01647 3872424   XP_956269 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta