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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hif1a, hypoxia inducible factor 1, alpha subunit
Sequence ID:NM_010431
Entrez Gene ID:15251
Ensembl ID:ENSMUSG00000021109

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12 C3|12 31.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:12: 73946535 - 73947227

 Exon Info From UCSC:
NM_010431

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4019056Full LengthBC026139hypoxia inducible factor 1, alpha subunit

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010431 NP_034561 Q61221  

Related Sequences

 
mRNAGenPeptSwissProt
AF003695 AAC53455 Q61221
BC026139 AAH26139 Q61221
AK017853 BAB30975 Q61221
AK033471 BAC28305 Q61221
AK034087 BAC28578 Q61221
AK076395 BAC36320 Q61221
AK138944 BAE23829 Q3UU00
AK150367 BAE29500 Q3UCW2
X95002 CAA64458 Q61221
X95580 CAA64833 Q61221

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hif1a NP_034561 R.norvegicus Hif1a 29560   NP_077335 97
H.sapiens HIF1A 3091 Gene Info NP_001521 91
D.melanogaster sima 43580   NP_524584 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta