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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Stx8, syntaxin 8
Sequence ID:NM_018768
Entrez Gene ID:55943
Ensembl ID:ENSMUSG00000020903

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B3|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 67966485 - 68203876

NM_018768 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1356777998467780018
361356778327367783372
1362306778673467786828
2313416779806467798174
3424666782481667824940
4675596783440767834499
5606616792277867922879
66241046801720768020649

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6774827Full LengthBC048479syntaxin 8
6821351Full LengthBC048167syntaxin 8
30295878Full LengthBC061118syntaxin 8

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_061238  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018768 NP_061238 Q5F234
O88983
SNARE

Related Sequences

 
mRNAGenPeptSwissProt
AF093064 AAC64149 Q5F234
O88983
AF036716 AAC95286 Q5F234
O88983
BC048167 AAH48167 Q5F234
O88983
BC048479 AAH48479 Q5F234
O88983
BC061118 AAH61118 Q9D0J1
AB040054 BAB20500 Q5F234
O88983
AK003297 BAB22698 Q5F234
O88983
AK011376 BAB27578 Q9D0J1
AK035105 BAC28946 Q8BS59

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Stx8 NP_061238 R.norvegicus Stx8 59074   NP_113844 99
H.sapiens STX8 9482 Gene Info NP_004844 93
A.gambiae AgaP_AGAP006100 1276773   XP_316159 31
D.melanogaster Syx8 39847   NP_524113 27

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)