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Gene Info

Gene Information For:Mm. Pafah1b1, platelet-activating factor acetylhydrolase, isoform 1b, subunit 1
Sequence ID:NM_013625
NR_037610
Entrez Gene ID:18472
Ensembl ID:ENSMUSG00000020745

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B3|11 44.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 74677312 - 74724373

 Exon Info From UCSC:
NM_013625

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4017963Full LengthBC026141platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit
4507474Full LengthBC014831platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038653  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013625 NP_038653 P63005
Q5SW18
WD40
LisH

Related Sequences

 
mRNAGenPeptSwissProt
U95116 AAC04610 P63005
Q5SW18
L25109 AAD23059 P63005
BC014831 AAH14831 P63005
Q5SW18
BC026141 AAH26141 P63005
Q5SW18
AY189217 AAO41716 P63005
Q5SW18
AY189218 AAO41717 P63005
Q5SW18
AK144908 BAE26129 P63005
Q5SW18
AK147207 BAE27764 P63005
Q5SW18
AK147237 BAE27787 P63005
Q5SW18
AK147309 BAE27837 Q3UHM0
AK147507 BAE27961 P63005
Q5SW18
AK147515 BAE27965 Q3UH92
AK147533 BAE27977 P63005
Q5SW18
AK147793 BAE28141 Q3UGR6
AK160764 BAE35996 Q3TUH5
AK164008 BAE37586 P63005
Q5SW18
AK167448 BAE39534 Q3TJG1
AK167824 BAE39846 Q3TIK0
AK168929 BAE40742 P63005
Q5SW18
AK168960 BAE40766 P63005
Q5SW18

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pafah1b1 NP_038653 H.sapiens PAFAH1B1 5048 Gene Info NP_000421 100
R.norvegicus Pafah1b1 83572   NP_113951 100
A.gambiae AgaP_AGAP011849 1280803   XP_320670 72
D.melanogaster Lis-1 36791   NP_788370 71
C.elegans lis-1 176758   NP_499755 59
N.crassa NCU04534 3873083   XP_956945 51
N.crassa NCU04312 3877099   XP_960958 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta