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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Gbe1, glucan (1,4-alpha-), branching enzyme 1
Sequence ID:NM_028803
Entrez Gene ID:74185
Ensembl ID:ENSMUSG00000022707

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 C2|16 41.9 cM

Chromosomal Position (from UCSC)

Chromosomal Position:16: 70314135 - 70569714

 Exon Info From UCSC:
NM_028803

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4526961Full LengthBC017541glucan (1,4-alpha-), branching enzyme 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_083079  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_028803 NP_083079 Q9D6Y9 EC 2.4.1.18 Alpha-amylase
Alpha-amylase_C
Isoamylase_N

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC017541 AAH17541 Q9D6Y9 EC 2.4.1.18
AK009815 BAB26519 Q9D6Y9 EC 2.4.1.18
AK013167 BAC25395 Q8BT78  
AK050365 BAC34210 Q9D6Y9 EC 2.4.1.18
AK050423 BAC34248 Q8C7E6  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gbe1 NP_083079 R.norvegicus Gbe1 288333   NP_001093972 96
H.sapiens GBE1 2632 Gene Info NP_000149 91
N.crassa NCU05429 3879400   XP_963252 64
S.cerevisiae GLC3 856705   NP_010905 63
A.gambiae AgaP_AGAP010428 1272619   XP_311519 62
D.melanogaster CG33138 326264   NP_788342 62
A.thaliana SBE2.2 831769   NP_195985 59
A.thaliana SBE2.1 818212   NP_181180 59
C.elegans T04A8.7 3565201   NP_497961 58

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)