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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Nlrx1, NLR family member X1
Sequence ID:XM_003946426
NM_001163742
NM_001163743
NM_178420
Entrez Gene ID:270151
Ensembl ID:ENSMUSG00000032109

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 A5.2|9

Chromosomal Position (from UCSC)

Chromosomal Position:9: 44262345 - 44268170

 Exon Info From UCSC:
NM_001163742
NM_001163743
NM_178420

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30012053Full LengthBC050054NLR family member X1
1314641IncompleteBC035045cDNA sequence BC034204
4987053IncompleteBC034204NLR family member X1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_848507  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001163742 NP_001157214    
NM_001163743 NP_001157215    
NM_178420 NP_848507 Q3TL44 NACHT

Related Sequences

 
mRNAGenPeptSwissProt
BC050054 AAH50054 Q3TL44
AK089260 BAC40818 Q3TL44
AK145988 BAE26810 Q3TL44
AK166689 BAE38948 Q3TL44
XM_003946426 XP_003946475  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nlrx1 NP_001157214 R.norvegicus Nlrx1 315599   NP_001020181 97
H.sapiens NLRX1 79671 Gene Info NP_078894 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)